CDS

Accession Number TCMCG006C18504
gbkey CDS
Protein Id XP_022558136.1
Location complement(join(4637629..4637742,4640790..4641028,4641119..4641452,4641544..4641609,4641689..4641817,4641928..4642068,4642177..4642187,4642293..4642440,4642566..4642694,4642834..4642971,4643086..4643154,4643258..4643326,4643421..4643677,4643763..4643910,4643991..4644153,4644237..4644369,4644448..4644625,4644703..4644939,4645021..4645089,4645184..4645283,4645376..4645431))
Gene LOC106355649
GeneID 106355649
Organism Brassica napus

Protein

Length 975aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022702415.1
Definition villin-4-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category Z
Description at4g30160 (e 0.0) vln4, atvln4 vln4 (arabidopsis thaliana villin 4)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
ko04812        [VIEW IN KEGG]
KEGG_ko ko:K05768        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04666        [VIEW IN KEGG]
ko04810        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map04666        [VIEW IN KEGG]
map04810        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007015        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008064        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008154        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030042        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030832        [VIEW IN EMBL-EBI]
GO:0030833        [VIEW IN EMBL-EBI]
GO:0030834        [VIEW IN EMBL-EBI]
GO:0030835        [VIEW IN EMBL-EBI]
GO:0030837        [VIEW IN EMBL-EBI]
GO:0031333        [VIEW IN EMBL-EBI]
GO:0032271        [VIEW IN EMBL-EBI]
GO:0032272        [VIEW IN EMBL-EBI]
GO:0032432        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0032984        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043242        [VIEW IN EMBL-EBI]
GO:0043244        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0043624        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051014        [VIEW IN EMBL-EBI]
GO:0051015        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051261        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051494        [VIEW IN EMBL-EBI]
GO:0051592        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051693        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097435        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0099636        [VIEW IN EMBL-EBI]
GO:0110053        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901879        [VIEW IN EMBL-EBI]
GO:1901880        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902904        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGTTTCCATGAGAGATTTGGATCCAGCTTTCCAAGGAGCTGGACAGAAAGCCGGTATTGAGGTATGGCGTATAGAGAATTTTAGCCCTGCACCCATCCCAAAGTCTTCTATTGGGAAGTTTTTCACCGGAGACTCTTACATAGTACTGAAGACAACGGCGTTAAAAACAGGTGCGTTGCGGCACGATATCCATTACTGGCTTGGTAAAGATACCTCTCAAGATGAAGCTGGGACTGCTGCAGTTAAGACGGTTGAACTAGATGCTGCTCTAGGAGGTCGTGCTGTTCAGTATCGAGAAGTTCAAGGCCACGAAACCGAGAAGTTCTTGTCTTATTTTAAGCCATGTATAATACCTCAAGAAGGTGGAGTAGCTTCAGGGTTCAAACATGTGGAAGCTGAAGAACATGTTACCCGCTTGTTCGTCTGCAGGGGAAAACATGTTGTCCATGTCAAAGAGGTTCCGTTTGCTCGTAGCTCTTTAAACCATGACGATATATACATTCTTGACACAAAGTCCAAGATTTTCCAATTCAATGGATCTAATTCAAGTATCCAAGAGAGAGCCAAAGCATTGGAAGTGGTTCAGTACATCAAAGACACTTACCATGATGGGACATGTGAAGTTGCTACAGTTGAGGATGGGAGACTTATGGCTGATGCTGATAGTGGAGAGTTTTGGGGTTTCTTTGGTGGGTTCGCACCCTTACCTAGAAAAACAGCTAATGCTGAAGACAAAACTGTCACTTTCGATATCAAAAAACTATTTTGTGTGGAGAAGGGAAAAGCAAATCCTGTTGAAGACGATACTTTGAAGAGGGAGATGCTGGATACAAACAAGTGCTACATTCTTGACTGTGGACTCGAAGTGTTTGTTTGGATGGGACGAACAACATCTCTTGATGATAGAAAAATTGCCAGTGGAGCAGCAGAAGAAATGATCCGTTCATCTGAACGTCCTAAATCGCAAATGATCCGCATAATAGAAGGGTTTGAAACCGTGCCATTCCGATCAAAGTTTGATACATGGACTCAAGAAACTAATACAACTGTGTCAGAGGATGGTAGAGGCAGAGTTGCTGCTCTCTTGCAACGAGAAGGAGTAAACGTGAGAGGACTAATGAAAGCTGCTCCGCCTAAAGAGGAGCTCGAAGCTTTCATTGATTGCACGGGGAATCTGCAGGTTTGGCGTGTGAATGGCCAGGAAAAGATACTCCTTCAGGCTGCTGATCATTCGAAGTTCTACAGTGGAGATTGCTATGTTTTCCAGTATTCTTATCCTGGAGAAGAGAAAGAAGAAGTGCTTATAGGGACTTGGTTCGGAAAGCAAAGTGTGGAGGAAGAAAGAGCTTCTGCCGTTTCTATTGCGAGCAAAATGGTTGAGTCAATGAAGTTTGTGCCAGCCCAAGCTCGCATCTATGAAGGAAAGGAACCTGTTCAGTTCTTCGTCATTATGCAAAGCTTTATAGTTTTCAAGGGTGGTATTAGCAGCGGATACAAGAAATACATAGCAGAGAAAGAAGTTGATGATGATACATACAATGAGAATGGTCTTGCTCTCTTCCGCATTCAAGGGTCTGGTCCTGAAAATATGCAAGCAATACAAGTTGACCCGGTTGCTTCATCACTGAACTCCTCATACTGTTACATACTACATAATGATTCTTCTGTCTTTACTTGGATCGGGAATCTAGCTACCTCAACTGACCAGGAACTCGTCGAGAGGCAACTTGATCTTATAAAGCCAAACCTACAGACTAGAGCACAAAAGGAAGGTTCAGAATCAGAACAGTTCTGGGAGTTATTAGGAGGCAAAACCGAATATTCGAGCCAAAAGCTCACAAAAGAACCTGAGAGTGACCCTCACTTGTTCTCCTGCACATTCACTAAAGAAGTTCTGAAGGTGACAGAGATATATAACTTCACACAGGATGACTTGATGACTGAAGATATATTTATAGTAGACTGTCACTCAGAGATCTTTGTATGGGTTGGCCAAGAAGTAGTCCCTAAGAACAAGTTGCTAGCGTTAACTATTGGAGAGAAATTCATCGAGAAAGATTCTCTCCTGGAAAAGTTATCCCCTGAAGCCCCTATATATGTGATCATGGAAGGTGGTGAGCCAAGTTTCTTCACCCGGTTTTTCACTTCTTGGGATTCCTCAAAATCAGCTATGCATGGAAACTCATTCCAAAGAAAACTCAAAATTGTCAAAAATGGTGGAACTCCAGTTGCAGATAAACCAAAACGAAGAACACCAGCTTCATATGGTGGCCGTGCTGGCGTTCCTGAAAAGTCACAGCAGCGGTCAAGAACCATGTCGTTAAGTCCAGACAGGGTTCGCGTGAGGGGAAGATCTCCAGCGTTCAATGCACTCGCAGCAACATTTGAGAACCAGAACGCAAGAAACCTCTCAACTCCTCCCCCAGTAGTTAGAAAACTCTACCCGAGATCTGTTACTCCTGATTCCGCAAGGCTTGCTCCCAAGTCTTCAGCCATTGCTTCTCGTAGTGCCCTTTTCGAAAAATTCAAAACACCTCCTCAAGAACCTTTAATCCCAAAATCCATCAAAGCGAGCCCGAAGACACTCGAGTCTCCAGCGCCAGAATCCAGCTCAAAAGGAAAGGAAGAGAAAAAGGAAAATCACAAGGAGGGGGAGAAATCGATGAGCAGCAAGATAGTATCTCTGACGATTCAAGAAGATGCTAAAGAAGGTGTGGAAGAGGAAGAAGATTTGCCAGCTCACCCATACGAACGTCTCAAGACAACTTCACCTGATCCTGTCACAGACATTGATGTAACAAGGAGAGAGGCTTACCTTTCATCAGAGGAGTTCAAAGAGAAGTTTGGTATGACGAAAGAAGCTTTCTACAAGCTGCCTAAATGGAAACAAAACAAATTCAAGATGGCTGTTCAACTCTTCTGA
Protein:  
MSVSMRDLDPAFQGAGQKAGIEVWRIENFSPAPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWLGKDTSQDEAGTAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHVEAEEHVTRLFVCRGKHVVHVKEVPFARSSLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCEVATVEDGRLMADADSGEFWGFFGGFAPLPRKTANAEDKTVTFDIKKLFCVEKGKANPVEDDTLKREMLDTNKCYILDCGLEVFVWMGRTTSLDDRKIASGAAEEMIRSSERPKSQMIRIIEGFETVPFRSKFDTWTQETNTTVSEDGRGRVAALLQREGVNVRGLMKAAPPKEELEAFIDCTGNLQVWRVNGQEKILLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGTWFGKQSVEEERASAVSIASKMVESMKFVPAQARIYEGKEPVQFFVIMQSFIVFKGGISSGYKKYIAEKEVDDDTYNENGLALFRIQGSGPENMQAIQVDPVASSLNSSYCYILHNDSSVFTWIGNLATSTDQELVERQLDLIKPNLQTRAQKEGSESEQFWELLGGKTEYSSQKLTKEPESDPHLFSCTFTKEVLKVTEIYNFTQDDLMTEDIFIVDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRAGVPEKSQQRSRTMSLSPDRVRVRGRSPAFNALAATFENQNARNLSTPPPVVRKLYPRSVTPDSARLAPKSSAIASRSALFEKFKTPPQEPLIPKSIKASPKTLESPAPESSSKGKEEKKENHKEGEKSMSSKIVSLTIQEDAKEGVEEEEDLPAHPYERLKTTSPDPVTDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF